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Palmer, W. H. and Obbard, D. J. (2016). Variation and evolution in the glutamine-rich repeat region of Drosophila Argonaute-2. G3 (Bethesda) 6(8):2563-72. PubMed ID: 27317784 Webster, C. L., Waldron, F. M., Robertson, S., Crowson, D., Ferrari, G., Quintana, J. F., Brouqui, J. M., Bayne, E. H., Longdon, B., Buck, A. H., Lazzaro, B. P., Akorli, J., Haddrill, P. R. and Obbard, D. J. (2015). The Discovery, Distribution, and Evolution of Viruses Associated with Drosophila melanogaster. PLoS Biol 13: e1002210. PubMed ID: 26172158 van Mierlo, J. T., Overheul, G. J., Obadia, B., van Cleef, K. W., Webster, C. L., Saleh, M. C., Obbard, D. J. and van Rij, R. P. (2014). Novel Drosophila viruses encode host-specific suppressors of RNAi. PLoS Pathog 10: e1004256. PubMed ID: 25032815 Obbard, D. J., Maclennan, J., Kim, K. W., Rambaut, A., O'Grady, P. M. and Jiggins, F. M. (2012). Estimating divergence dates and substitution rates in the Drosophila phylogeny. Mol Biol Evol 29: 3459-3473. PubMed ID: 22683811 Ngo, S., Liang, J., Su, Y. H. and O'Brien, L. E. (2020). Disruption of EGF Feedback by Intestinal Tumors and Neighboring Cells in Drosophila. Curr Biol 30(8): 1537-1546 e1533. PubMed ID: 32243854 Koyama, L. A. J., Aranda-Diaz, A., Su, Y. H., Balachandra, S., Martin, J. L., Ludington, W. B., Huang, K. C. and O'Brien, L. E. (2020). Bellymount enables longitudinal, intravital imaging of abdominal organs and the gut microbiota in adult Drosophila. PLoS Biol 18(1): e3000567. PubMed ID: 31986129 Martin, J. L., Sanders, E. N., Moreno-Roman, P., Jaramillo Koyama, L. A., Balachandra, S., Du, X. and O'Brien, L. E. (2018). Long-term live imaging of the Drosophila adult midgut reveals real-time dynamics of division, differentiation and loss. Elife 7. PubMed ID: 30427308 Barraud, P., Heale, B. S., O'Connell, M. A. and Allain, F. H. (2012). Solution structure of the N-terminal dsRBD of Drosophila ADAR and interaction studies with RNA. Biochimie 94: 1499-1509. PubMed ID: 22210494 Paro, S., Li, X., O'Connell, M. A. and Keegan, L. P. (2012). Regulation and functions of ADAR in drosophila. Curr Top Microbiol Immunol 353: 221-236. PubMed ID: 21761288 Keegan, L. P., McGurk, L., Palavicini, J. P., Brindle, J., Paro, S., Li, X., Rosenthal, J. J. and O'Connell, M. A. (2011). Functional conservation in human and Drosophila of Metazoan ADAR2 involved in RNA editing: loss of ADAR1 in insects. Nucleic Acids Res 39: 7249-7262. PubMed ID: 21622951 Yang, S., Wu, X., Daoutidou, E. I., Zhang, Y., Shimell, M., Chuang, K. H., Peterson, A. J., O'Connor, M. B. and Zheng, X. (2022). The NDNF-like factor Nord is a Hedgehog-induced extracellular BMP modulator that regulates Drosophila wing patterning and growth. Elife 11. PubMed ID: 35037619 Goldsmith, S. L., Shimell, M. J., Tauscher, P., Daly, S. M., Shimmi, O., O'Connor, M. B. and Newfeld, S. J. (2022). New resources for the Drosophila 4th chromosome: FRT101F enabled mitotic clones and Bloom syndrome helicase enabled meiotic recombination. G3 (Bethesda). PubMed ID: 35084488 Herrera, S. C., Sainz de la Maza, D., Grmai, L., Margolis, S., Plessel, R., Burel, M., O'Connor, M., Amoyel, M. and Bach, E. A. (2021). Proliferative stem cells maintain quiescence of their niche by secreting the Activin inhibitor Follistatin. Dev Cell 56(16): 2284-2294.e2286. PubMed ID: 34363758 Pan, X. and O'Connor, M. B. (2021). Coordination among multiple receptor tyrosine kinase signals controls Drosophila developmental timing and body size. Cell Rep 36(9): 109644. PubMed ID: 34469735 Hughson, B. N., Shimell, M. and O'Connor, M. B. (2021). AKH Signaling in D. melanogaster Alters Larval Development in a Nutrient-Dependent Manner That Influences Adult Metabolism. Front Physiol 12: 619219. PubMed ID: 33708137 Kim, M. J. and O'Connor, M. B. (2021). Drosophila Activin signaling promotes muscle growth through InR/TORC1-dependent and -independent processes. Development 148(1). PubMed ID: 33234715 Maselko, M., Feltman, N., Upadhyay, A., Hayward, A., Das, S., Myslicki, N., Peterson, A. J., O'Connor, M. B. and Smanski, M. J. (2020). Engineering multiple species-like genetic incompatibilities in insects. Nat Commun 11(1): 4468. PubMed ID: 32901021 Upadhyay, A., Peterson, A. J., Kim, M. J. and O'Connor, M. B. (2020). Muscle-derived Myoglianin regulates Drosophila imaginal disc growth. Elife 9. PubMed ID: 32633716 Khan, A., Paro, S., McGurk, L., Sambrani, N., Hogg, M. C., Brindle, J., Pennetta, G., Keegan, L. P. and O'Connell, M. A. (2020). Membrane and synaptic defects leading to neurodegeneration in Adar mutant Drosophila are rescued by increased autophagy. BMC Biol 18(1): 15. PubMed ID: 32059717 Moss-Taylor, L., Upadhyay, A., Pan, X., Kim, M. J. and O'Connor, M. B. (2019). Body size and tissue-scaling is regulated by motoneuron-derived activinbeta in Drosophila melanogaster. Genetics. PubMed ID: 31585954 Langerak, S., Kim, M. J., Lamberg, H., Godinez, M., Main, M., Winslow, L., O'Connor, M. B. and Zhu, C. C. (2018). The Drosophila TGF-beta/Activin-like ligands Dawdle and Myoglianin appear to modulate adult lifespan through regulation of 26S proteasome function in adult muscle. Biol Open 7(4). PubMed ID: 29615416 Kanai, M. I., Kim, M. J., Akiyama, T., Takemura, M., Wharton, K., O'Connor, M. B. and Nakato, H. (2018). Regulation of neuroblast proliferation by surface glia in the Drosophila larval brain. Sci Rep 8(1): 3730. PubMed ID: 29487331 Makhijani, K., Alexander, B., Rao, D., Petraki, S., Herboso, L., Kukar, K., Batool, I., Wachner, S., Gold, K. S., Wong, C., O'Connor, M. B. and Bruckner, K. (2017). Regulation of Drosophila hematopoietic sites by Activin-beta from active sensory neurons. Nat Commun 8: 15990. PubMed ID: 28748922 Gratz, S. J., Goel, P., Bruckner, J. J., Hernandez, R. X., Khateeb, K., Macleod, G. T., Dickman, D. and O'Connor-Giles, K. M. (2019). Endogenous tagging reveals differential regulation of Ca(2+) channels at single AZs during presynaptic homeostatic potentiation and depression. J Neurosci. PubMed ID: 30692227 Bruckner, J. J., Zhan, H., Gratz, S. J., Rao, M., Ukken, F., Zilberg, G. and O'Connor-Giles, K. M. (2017). Fife organizes synaptic vesicles and calcium channels for high-probability neurotransmitter release. J Cell Biol 216(1): 231-246. PubMed ID: 27998991 Zhan, H., Bruckner, J., Zhang, Z. and O'Connor-Giles, K. (2016). Three-dimensional imaging of Drosophila motor synapses reveals ultrastructural organizational patterns. J Neurogenet 30(3-4): 237-246. PubMed ID: 27981875 Ukken, F. P., Bruckner, J. J., Weir, K. L., Hope, S. J., Sison, S. L., Birschbach, R. M., Hicks, L., Taylor, K. L., Dent, E. W., Gonsalvez, G. B. and O'Connor-Giles, K. M. (2015). BAR-SH3 Sorting nexins are conserved Nervous wreck interactors that organize synapses and promote neurotransmission. J Cell Sci. PubMed ID: 26567222 Gratz, S. J., Rubinstein, C. D., Harrison, M. M., Wildonger, J. and O'Connor-Giles, K. M. (2015). CRISPR-Cas9 Genome Editing in Drosophila. Curr Protoc Mol Biol 111: 31 32 31-31 32 20. PubMed ID: 26131852 Gratz, S. J., Harrison, M. M., Wildonger, J. and O'Connor-Giles, K. M. (2015). Precise Genome Editing of Drosophila with CRISPR RNA-Guided Cas9. Methods Mol Biol 1311: 335-348. PubMed ID: 25981484 Gratz, S. J., Ukken, F. P., Rubinstein, C. D., Thiede, G., Donohue, L. K., Cummings, A. M. and O'Connor-Giles, K. M. (2014). Highly specific and efficient CRISPR/Cas9-catalyzed homology-directed repair in Drosophila. Genetics 196: 961-971. PubMed ID: 24478335 Bruckner, J. J., Gratz, S. J., Slind, J. K., Geske, R. R., Cummings, A. M., Galindo, S. E., Donohue, L. K. and O'Connor-Giles, K. M. (2012). Fife, a Drosophila Piccolo-RIM homolog, promotes active zone organization and neurotransmitter release. J Neurosci 32: 17048-17058. PubMed ID: 23197698 Setiawan, L., Pan, X., Woods, A. L., O'Connor, M. B. and Hariharan, I. K. (2018). The BMP2/4 ortholog Dpp can function as an inter-organ signal that regulates developmental timing. Life Sci Alliance 1(6): e201800216. PubMed ID: 30515478 Shimell, M., Pan, X., Martin, F. A., Ghosh, A. C., Leopold, P., O'Connor, M. B. and Romero, N. M. (2018). Prothoracicotropic hormone modulates environmental adaptive plasticity through the control of developmental timing. Development 145(6). PubMed ID: 29467242 Kim, M. J. and O'Connor, M. B. (2014). Anterograde Activin Signaling Regulates Postsynaptic Membrane Potential and GluRIIA/B Abundance at the Drosophila Neuromuscular Junction. PLoS One 9: e107443. PubMed ID: 25255438 Ting, C. Y., McQueen, P. G., Pandya, N., Lin, T. Y., Yang, M., Reddy, O. V., O'Connor, M. B., McAuliffe, M. and Lee, C. H. (2014). Photoreceptor-Derived Activin Promotes Dendritic Termination and Restricts the Receptive Fields of First-Order Interneurons in Drosophila. Neuron. PubMed ID: 24462039 Yamanaka, N., Romero, N. M., Martin, F. A., Rewitz, K. F., Sun, M., O'Connor, M. B. and Leopold, P. (2013). Neuroendocrine control of Drosophila larval light preference. Science 341: 1113-1116. PubMed ID: 24009394 Peterson, A. J. and O'Connor, M. B. (2013). Activin receptor inhibition by Smad2 regulates Drosophila wing disc patterning through BMP-response elements. Development 140: 649-659. PubMed ID: 23293296 Yamanaka, N., Rewitz, K. F. and O'Connor, M. B. (2013). Ecdysone control of developmental transitions: lessons from Drosophila research. Annu Rev Entomol 58: 497-516. PubMed ID: 23072462 Peterson, A. J., Jensen, P. A., Shimell, M., Stefancsik, R., Wijayatonge, R., Herder, R., Raftery, L. A. and O'Connor, M. B. (2012). R-Smad competition controls activin receptor output in Drosophila. PLoS One 7: e36548. PubMed ID: 22563507 Dimitroff, B., Howe, K., Watson, A., Campion, B., Lee, H. G., Zhao, N., O'Connor, M. B., Neufeld, T. P. and Selleck, S. B. (2012). Diet and energy-sensing inputs affect TorC1-mediated axon misrouting but not TorC2-directed synapse growth in a Drosophila model of tuberous sclerosis. PLoS One 7: e30722. PubMed ID: 22319582 Luan, H., Kuzin, A., Odenwald, W. F. and White, B. H. (2020). Cre-assisted fine-mapping of neural circuits using orthogonal split inteins. Elife 9. PubMed ID: 32286225 Ross, J., Kuzin, A., Brody, T. and Odenwald, W. F. (2018). Mutational analysis of a Drosophila neuroblast enhancer governing nubbin expression during CNS development. Genesis. PubMed ID: 30005136 Kuzin, A., Smith, S., Brody, T. and Odenwald, W. F. (2018). Structure and cis-regulatory analysis of a Drosophila grainyhead neuroblast enhancer. Genesis 56(3): e23094. PubMed ID: 29417712 Brody, T., Yavatkar, A. S., Park, D. S., Kuzin, A., Ross, J. and Odenwald, W. F. (2017). Flavivirus and Filovirus EvoPrinters: New alignment tools for the comparative analysis of viral evolution. PLoS Negl Trop Dis 11(6): e0005673. PubMed ID: 28622346 Ross, J., Kuzin, A., Brody, T. and Odenwald, W. F. (2015). cis-regulatory analysis of the Drosophila pdm locus reveals a diversity of neural enhancers. BMC Genomics 16: 700. PubMed ID: 26377945 Awasaki, T., Kao, C. F., Lee, Y. J., Yang, C. P., Huang, Y., Pfeiffer, B. D., Luan, H., Jing, X., Huang, Y. F., He, Y., Schroeder, M. D., Kuzin, A., Brody, T., Zugates, C. T., Odenwald, W. F. and Lee, T. (2014). Making Drosophila lineage-restricted drivers via patterned recombination in neuroblasts. Nat Neurosci. PubMed ID: 24561995 Wang, Y. C., Yang, J. S., Johnston, R., Ren, Q., Lee, Y. J., Luan, H., Brody, T., Odenwald, W. F. and Lee, T. (2014). Drosophila intermediate neural progenitors produce lineage-dependent related series of diverse neurons. Development 141: 488. PubMed ID: 24381200 Kundu, M., Kuzin, A., Lin, T. Y., Lee, C. H., Brody, T., Odenwald, W. F. (2013) cis-Regulatory Complexity within a Large Non-Coding Region in the Drosophila Genome. PLoS One 8: e60137. PubMed ID: 23613719 Kuzin, A., Kundu, M., Ross, J., Koizumi, K., Brody, T. and Odenwald, W. F. (2012). The cis-regulatory dynamics of the Drosophila CNS determinant castor are controlled by multiple sub-pattern enhancers. Gene Expr Patterns 12: 261-272. PubMed ID: 22691242 Brody, T., Yavatkar, A.S., Kuzin, A., Kundu, M., Tyson, L.J., Ross, J., Lin, T.Y., Lee, C.H., Awasaki, T., Lee, T. and Odenwald, W.F. (2012) Use of a Drosophila genome-wide conserved sequence database to identify functionally related cis-regulatory enhancers, Developmental Dynamics 241, 169-189. PubMed ID: 22174086 D'Silva, N. M., Donini, A. and O'Donnell, M. J. (2017). The roles of V-type H+-ATPase and Na+/K+-ATPase in energizing K+ and H+ transport in larval Drosophila gut epithelia. J Insect Physiol. PubMed ID: 28188726 Bednářová, A., Hanna, M.E., Rakshit, K., O'Donnell, J.M. and Krishnan, N. (2017). Disruption of dopamine homeostasis has sexually dimorphic effects on senescence characteristics of Drosophila melanogaster. Eur J Neurosci [Epub ahead of print]. PubMed ID: 28112452 Browne, A. and O'Donnell, M. J. (2016). Segment-specific Ca transport by isolated Malpighian tubules of Drosophila melanogaster: A comparison of larval and adult stages. J Insect Physiol 87: 1-11. PubMed ID: 26802560 Ajjuri, R. R. and O'Donnell, J. M. (2013). Novel Whole-tissue Quantitative Assay of Nitric Oxide Levels in Drosophila Neuroinflammatory Response. J Vis Exp. PubMed ID: 24335747 Browne, A. and O'Donnell, M. J. (2013). Ammonium secretion by Malpighian tubules of Drosophila melanogaster: application of a novel ammonium-selective microelectrode. J Exp Biol. PubMed ID: 23821719 Seabrooke, S. and O'Donnell, M. J. (2013). Oatp58Dc contributes to blood-brain barrier function by excluding organic anions from the Drosophila brain. Am J Physiol Cell Physiol. PubMed ID: 23804204 Chahine, S., Seabrooke, S. and O'Donnell, M. J. (2012). Effects of genetic knock-down of organic anion transporter genes on secretion of fluorescent organic ions by Malpighian tubules of Drosophila melanogaster. Arch Insect Biochem Physiol 81: 228-240. PubMed ID: 22972675 Chahine, S., Campos, A. and O'Donnell, M. J. (2012). Genetic knockdown of a single organic anion transporter alters the expression of functionally related genes in Malpighian tubules of Drosophila melanogaster. J Exp Biol 215: 2601-2610. PubMed ID: 22786636 Ruiz-Sanchez, E. and O'Donnell, M. J. (2012). Effects of the microbial metabolite destruxin A on ion transport by the gut and renal epithelia of Drosophila melanogaster. Arch Insect Biochem Physiol 80: 109-122. PubMed ID: 22522660 Browne, A. and O'Donnell, M. J. (2013). Ammonium secretion by Malpighian tubules of Drosophila melanogaster: application of a novel ammonium-selective microelectrode. J Exp Biol 216: 3818-3827. PubMed ID: 23821719 Seabrooke, S. and O'Donnell, M. J. (2013). Oatp58Dc contributes to blood-brain barrier function by excluding organic anions from the Drosophila brain. Am J Physiol Cell Physiol 305: C558-567. PubMed ID: 23804204 Chahine, S., Seabrooke, S. and O'Donnell, M. J. (2012). Effects of genetic knock-down of organic anion transporter genes on secretion of fluorescent organic ions by Malpighian tubules of Drosophila melanogaster. Arch Insect Biochem Physiol 81: 228-240. PubMed ID: 22972675 Roemmich, A. J., Vu, T., Lukacsovich, T., Hawkins, C., Schutte, S. S. and O'Dowd, D. K. (2021). Seizure phenotype and underlying cellular defects in Drosophila knock-in models of DS (R1648C) and GEFS+ (R1648H) SCN1A epilepsy. eNeuro. PubMed ID: 34475263 Guven-Ozkan, T., Busto, G. U., Schutte, S. S., Cervantes-Sandoval, I., O'Dowd, D. 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PubMed ID: 22965907 DeLuca, S. Z. and O'Farrell, P. H. (2012). Barriers to male transmission of mitochondrial DNA in sperm development. Dev Cell 22: 660-668. PubMed ID: 22421049 Costa, M. F. A. and Ohkura, H. (2019). The molecular architecture of the meiotic spindle is remodeled during metaphase arrest in oocytes. J Cell Biol. PubMed ID: 31278080 Rome, P. and Ohkura, H. (2018). A novel microtubule nucleation pathway for meiotic spindle assembly in oocytes. J Cell Biol. PubMed ID: 30087124 Breuer, M. and Ohkura, H. (2015). A negative loop within the nuclear pore complex controls global chromatin organization. Genes Dev 29: 1789-1794. PubMed ID: 26341556 Nikalayevich, E. and Ohkura, H. (2014). The NuRD nucleosome remodelling complex and NHK-1 kinase are required for chromosome condensation in oocytes. J Cell Sci. PubMed ID: 25501812 Clohisey, S. M., Dzhindzhev, N. S. and Ohkura, H. (2014). Kank Is an EB1 Interacting Protein that Localises to Muscle-Tendon Attachment Sites in Drosophila. 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(2011). A PAR-1-dependent orientation gradient of dynamic microtubules directs posterior cargo transport in the Drosophila oocyte. J Cell Biol 194: 121-135. PubMed ID: 21746854 Lucchetta, E.M. and Ohlstein, B. (2017). Amitosis of Polyploid Cells Regenerates Functional Stem Cells in the Drosophila Intestine. Cell Stem Cell [Epub ahead of print]. PubMed ID: 28343984 Guo, Z. and Ohlstein, B. (2015). Stem cell regulation. Bidirectional Notch signaling regulates Drosophila intestinal stem cell multipotency. Science 350 [Epub ahead of print]. PubMed ID: 26586765 Driver, I. and Ohlstein, B. (2014). Specification of regional intestinal stem cell identity during Drosophila metamorphosis. Development. PubMed ID: 24700821 Lucchetta, E. M. and Ohlstein, B. (2012). The Drosophila midgut: a model for stem cell driven tissue regeneration. Wiley Interdiscip Rev Dev Biol 1: 781-788. PubMed ID: 23799573 Guo, Z., Driver, I. and Ohlstein, B. (2013). Injury-induced BMP signaling negatively regulates Drosophila midgut homeostasis. J Cell Biol. PubMed ID: 23733344 Choi, N. H., Lucchetta, E. and Ohlstein B. (2011). Nonautonomous regulation of Drosophila midgut stem cell proliferation by the insulin-signaling pathway. Proc. Natl. Acad. Sci. 108(46): 18702-7. PubMed ID: 22049341 Mathur, D., Bost, A., Driver, I. and Ohlstein, B. (2010). A transient niche regulates the specification of Drosophila intestinal stem cells. Science 327: 210-213. PubMed ID: 20056890 Zhou, L., Lim, M. Y., Kaur, P., Saj, A., Bortolamiol-Becet, D., Gopal, V., Tolwinski, N., Tucker-Kellogg, G. and Okamura, K. (2018). Importance of miRNA stability and alternative primary miRNA isoforms in gene regulation during Drosophila development. Elife 7. PubMed ID: 30024380 Lim, M. Y., Ng, A. W., Chou, Y., Lim, T. P., Simcox, A., Tucker-Kellogg, G. and Okamura, K. (2016). 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