page 1: Histone3 in yeast, Tetrahymena and Arabidopsis
Histone H3 and gene repression in yeast
Active genes are tri-methylated at K4 of histone H3 in yeast
Histone H3 methylation and recruitment of silencing factors and cohesin to yeast centromeres
Interaction of RanGAP with H3 in yeast
Heterochromatin formation involves changes in histone modifications over multiple cell generations
Methylation of histone H3 targets programmed DNA elimination in Tetrahymena
DNA methylation controls histone H3 methylation and heterochromatin assembly in Arabidopsis
The chromatin landscape of Drosophila: comparisons between species, sexes, and chromosomes
page 2: H3K4 methylation and gene activation
MLL, the human homolog of Drosophila trithorax, maintains Hox gene expression H3 lysine 4-specific methylation
Automethylation activities within the Mixed Lineage Leukemia-1 (MLL1) core complex reveal evidence supporting a 'two-active site' model for multiple histone H3 lysine 4 methylation
Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation
The BRCT-domain containing protein PTIP links PAX2 to a histone H3, lysine 4 methyltransferase complex
Double chromodomains cooperate to recognize the methylated histone H3 tail
Histone H3 K36 methylation is mediated by a trans-histone methylation pathway involving an interaction between Set2 and histone H4
SET protein complex in vertebrates methylates H3
Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 5' transcribed regions
Feedback control of Set1 protein levels is important for proper H3K4 methylation pattern
Mammalian ASH1L is a histone methyltransferase that occupies the transcribed region of active genes
Ash1l methylates Lys36 of histone H3 independently of transcriptional elongation to counteract polycomb silencing
Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation
Methylation of histone H3R2 by PRMT6 and H3K4 by an MLL complex are mutually exclusive
Deubiquitylation of histone H2A activates transcriptional initiation via trans-histone cross-talk with H3K4 di- and tri-methylation
RAD6-Mediated transcription-coupled H2B ubiquitylation directly stimulates H3K4 methylation in human cells
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling
The MLL3/MLL4 branch of the COMPASS family is a major H3K4 monomethylase at enhancers
Crosstalk between NSL histone acetyltransferase and MLL/SET complexes: NSL complex functions in promoting histone H3K4 di-methylation activity by MLL/SET complexes
Large hypomethylated domains serve as strong repressive machinery for key developmental genes in vertebrates
page 3: Histone demethylation
A histone H3 lysine 27 demethylase regulates animal posterior development
The X-linked mental retardation gene SMCX/JARID1C defines a family of histone H3 lysine 4 demethylases
A histone methylation network regulates transgenerational epigenetic memory in C. elegans
SMRT-mediated repression of a jumonji-domain containing H3K27 demethylase in progression from neural stem cell to neuron
UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development
Jumonji modulates Polycomb activity and self-renewal versus differentiation of stem cells
The histone H3 lysine-27 demethylase Jmjd3 links inflammation to inhibition of polycomb-mediated gene silencing
Large hypomethylated domains serve as strong repressive machinery for key developmental genes in vertebrates
Jarid2 and PRC2, partners in regulating gene expression
The retinoblastoma binding protein RBP2 is an H3K4 demethylase
Coordinated regulation of transcriptional repression by the RBP2 H3K4 demethylase and Polycomb-Repressive Complex 2
Interaction with H3K27-demethylase and H3K4-methyltransferase activities are required for T-box protein-mediated activation
page 4: Histone modification during development
Dynamic reprogramming of histone acetylation and methylation in the first cell cycle of cloned mouse embryos
Histone arginine methylation regulates pluripotency in the early mouse embryo
H3K4me3 and H3K9,14Ac modifications mark the promoters of most protein-coding genes in human embryonic stem cells
H3 methylation and X inactivation
Establishment of Histone H3 methylation on the inactive X chromosome requires transient recruitment of Eed-Enx1 polycomb group complexes
Multiple spatially distinct types of facultative heterochromatin on the human inactive X chromosome
Dynamic reprogramming of histone acetylation and methylation in the first cell cycle of cloned mouse embryos
Histone arginine methylation regulates pluripotency in the early mouse embryo
Phosphorylation of Histone H3
Recruitment of basal transcription factors by Histone H3
Acetylation of histone tails by p300
Binding of the histone chaperone ASF1 to the CBP bromodomain promotes histone acetylation
Gene specific regulation via Histone H3 modification
Developmental regulation of H3 methylation
Enzyme cooperation in the Displacement of histone during the first minute of hormonal gene activation
beta-Catenin primes organizer gene expression by recruiting a histone H3 arginine 8 methyltransferase, Prmt2
Differential H3K4 methylation identifies developmentally poised hematopoietic genes
Polycomb group protein displacement and gene activation through MSK-dependent H3K27me3S28 phosphorylation
H3K79 methylation directly precedes the histone-to-protamine transition in mammalian spermatids and is sensitive to bacterial infections
A novel role of metal response element binding transcription factor 2 at the Hox gene cluster in the regulation of H3K27me3 by polycomb repressive complex 2
Capturing the onset of PRC2-mediated repressive domain formation
Structural basis for PRC2 decoding of active histone methylation marks H3K36me2/3
page 5: Histone dynamics during DNA replication
Assembly of histone H3 into nascent chromatin
Structural basis for the histone chaperone activity of Asf1
Acetylated lysine 56 on Histone H3 drives chromatin assembly after repair
Acetylation of Histone H3 lysine 56 regulates replication-coupled nucleosome assembly
A histone deacetylase pathway regulates mitosis by modulating Aurora B kinase activity
Histone deacetylase 3 is required for centromeric H3K4 deacetylation and sister chromatid cohesion
H3K4me3 and H3K9,14Ac modifications mark the promoters of most protein-coding genes in human embryonic stem cells
A chromatin-wide transition to H4K20 monomethylation impairs genome integrity and programmed DNA rearrangements in the mouse
Functional dynamics of histones H3 and H4 during gametogenesis
JMJD-5/KDM8 regulates H3K36me2 and is required for late steps of homologous recombination and genome integrity
page 6: Repression
Gene-specific targeting of H3K9 methylation is sufficient for initiating repression
Methylation of Histone H3 by Su(var)3-9 homologs: The role of HP1 homologs on chromatin structure of heterochromatin
HP1Hsalpha promotes nucleosome associations that drive chromatin condensation
SIRT1 regulates the histone methyl-transferase SUV39H1 during heterochromatin formation
Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein
Histone code pathway involving H3 S28 phosphorylation and K27 acetylation activates transcription and antagonizes polycomb silencing
MET-2-dependent H3K9 methylation suppresses transgenerational small RNA inheritance
Sequence determinants of human gene regulatory elements
page 7: Polycomb directed gene inactivation
Silencing of polycomb target genes is associated with methylation of histone H3 Lys 27
Role of the polycomb protein EED in the propagation of repressive histone marks
EZH1 and EZH2 cogovern histone H3K27 trimethylation and are essential for hair follicle homeostasis and wound repair
Double chromodomains cooperate to recognize the methylated histone H3 tail
Histone H3 K36 methylation is mediated by a trans-histone methylation pathway involving an interaction between Set2 and histone H4
Trimethylation of Lys36 on H3 restricts gene expression change during aging and impacts life span
Mouse polycomb proteins bind differentially to methylated histone H3 and RNA and are enriched in facultative heterochromatin
HOTAIR interacts with Polycomb Repressive Complex 2 (PRC2) and is required for PRC2 occupancy and histone H3 lysine-27 trimethylation of HOXD locus
Polycomb eviction as a new distant enhancer function
Histone methylation by PRC2 is inhibited by active chromatin marks